BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A11SP1|AL426459
(196 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 295 2e-80
>3x_Contig1638
Length = 14042
Score = 295 bits (147), Expect = 2e-80
Identities = 168/175 (96%), Gaps = 2/175 (1%)
Strand = Plus / Minus
Query: 22 aacttctttggatgggatgatcttggtcttktaccacaatttgtaaccgatgtatgagat 81
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5771 aacttcttcggatgggatgatcttggtcttgtaccacaatttgtaaccgatgtatgagat 5712
Query: 82 gatgtaagtkgggwtacctaatgtaaccagtgatgaatgatcttgtagtcgaaggtgtca 141
||||||||| ||| |||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5711 gatgtaagttgggatacc-aatgtaaccagtgatgaatga-cttgtagtcgaaggtgtca 5654
Query: 142 cctaagaatgcagggawgtttttgatcaaaccgatcaaaatgcaaaagaataagg 196
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5653 cctaagaatgcagggaagtttttgatcaaaccgatcaaaatgcaaaagaataagg 5599
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1230
Number of Sequences: 1807
Number of extensions: 1230
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 1
length of query: 196
length of database: 10,358,551
effective HSP length: 15
effective length of query: 181
effective length of database: 10,331,446
effective search space: 1869991726
effective search space used: 1869991726
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (99.0 bits)